USC-OGP 2-DE database Two-dimensional polyacrylamide gel electrophoresis database

USC-OGP 2-DE database  Search by                Maps             Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal World-2DPAGE Repository Exclude local DBs has only effect if a remote interface is selected

Searching in 'USC-OGP 2-DE database' for entry matching: P08708 USC-OGP 2-DE database:  P08708 P08708 General information about the entry View entry in simple text format Entry name RS17_HUMAN Primary accession number P08708 integrated into USC-OGP 2-DE database on  January 17, 2017 (release 1) 2D Annotations were last modified on January 17, 2017 (version 1) General Annotations were last modified on  April 5, 2017 (version 2) Name and origin of the protein Description RecName: Full=40S ribosomal protein S17 {ECO:0000305}; AltName: Full=Small ribosomal subunit protein eS17 {ECO:0000303|PubMed:24524803};. Gene name Name=RPS17 {ECO:0000312|HGNC:HGNC:10397} Synonyms=RPS17L {ECO:0000312|HGNC:HGNC:10397} Annotated species Homo sapiens (Human) [TaxID: 9606] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. References [1]   2D GEL CHARACTERIZATION Author 1., Author 2. Submitted (Mar-2011) to Current 2D PAGE maps for identified proteins How to interpret a protein UVEAL_MELANOMA_3-10 {UVEAL MELANOMA 3-10} Homo sapiens (Human)   map experimental info   UVEAL_MELANOMA_3-10 MAP LOCATIONS: SPOT OGP-1325: pI=4.22; Mw=18115 SPOT OGP-1333: pI=4.59; Mw=16158 SPOT OGP-1360: pI=5.19; Mw=12337 Cross-references UniProtKB/Swiss-Prot P08708; RS17_HUMAN. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 0.0 Entry name RS17_HUMAN Primary accession number P08708 Secondary accession number(s) B2R4U4 P0CW22 Sequence was last modified on  January 23, 2007 (version 2) Annotations were last modified on  March 15, 2017 (version 173) Name and origin of the protein Description RecName: Full=40S ribosomal protein S17 {ECO:0000305}; AltName: Full=Small ribosomal subunit protein eS17 {ECO:0000303|PubMed:24524803}; Gene name Name=RPS17 {ECO:0000312|HGNC:HGNC:10397} Synonyms=RPS17L {ECO:0000312|HGNC:HGNC:10397} Encoded on Name=RPS17 {ECO:0000312|HGNC:HGNC:10397}; Synonyms=RPS17L {ECO:0000312|HGNC:HGNC:10397 Keywords 3D-structure; Complete proteome; Diamond-Blackfan anemia; Direct protein sequencing; Isopeptide bond; Phosphoprotein; Polymorphism; Reference proteome; Ribonucleoprotein; Ribosomal protein; Ubl conjugation. Copyright Copyrighted by the UniProt Consortium, see http://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL M13932; AAA60284.1; -; mRNA EMBL M18000; AAA60285.1; -; Genomic_DNA EMBL AK026570; BAB15501.1; -; mRNA EMBL AK311951; BAG34891.1; -; mRNA EMBL AC245033; -; NOT_ANNOTATED_CDS; Genomic_DNA EMBL CH471188; EAW62454.1; -; Genomic_DNA EMBL BC009407; AAH09407.1; -; mRNA EMBL BC019899; AAH19899.1; -; mRNA EMBL BC022370; AAH22370.1; -; mRNA EMBL BC049824; AAH49824.1; -; mRNA EMBL BC070222; AAH70222.1; -; mRNA EMBL BC062715; AAH62715.1; -; mRNA EMBL BC071928; AAH71928.1; -; mRNA CCDS CCDS10320.1; -; . PIR JT0405; R4HU17; . RefSeq NP_001012.1; NM_001021.4; . UniGene Hs.433427; -; . UniGene Hs.512525; -; . PDB 4UG0; EM; -; SR=1-135 PDB 4V6X; EM; 5.00 A; AR=1-135 PDB 5A2Q; EM; 3.90 A; R=1-135 PDB 5AJ0; EM; 3.50 A; BR=1-135 PDB 5FLX; EM; 3.90 A; R=1-135 PDB 5T2C; EM; 3.60 A; Az=1-135 PDBsum 4UG0; -; . PDBsum 4V6X; -; . PDBsum 5A2Q; -; . PDBsum 5AJ0; -; . PDBsum 5FLX; -; . PDBsum 5T2C; -; . ProteinModelPortal P08708; -; . SMR P08708; -; . BioGrid 112132; 101; . IntAct P08708; 32; . MINT MINT-5002404; -; . STRING 9606.ENSP00000346046; -; . iPTMnet P08708; -; . PhosphoSitePlus P08708; -; . SwissPalm P08708; -; . EPD P08708; -; . PaxDb P08708; -; . PeptideAtlas P08708; -; . PRIDE P08708; -; . TopDownProteomics P08708; -; . TopDownProteomics P0CW22; -; . DNASU 6218; -; . Ensembl ENST00000330244; ENSP00000346046; ENSG00000182774; . Ensembl ENST00000617731; ENSP00000483755; ENSG00000278229; . GeneID 6218; -; . KEGG hsa:6218; -; . CTD 6218; -; . DisGeNET 6218; -; . GeneCards RPS17; -; . GeneReviews RPS17; -; . HGNC HGNC:10397; RPS17; . HPA HPA055060; -; . MalaCards RPS17; -; . MIM 180472; gene; . MIM 612527; phenotype; . neXtProt NX_P08708; -; . OpenTargets ENSG00000182774; -; . Orphanet 124; Blackfan-Diamond anemia; . PharmGKB PA34797; -; . eggNOG KOG0187; Eukaryota; . eggNOG COG1383; LUCA; . GeneTree ENSGT00390000006548; -; . HOGENOM HOG000227166; -; . HOVERGEN HBG001708; -; . InParanoid P08708; -; . KO K02962; -; . OMA VGMNFRT; -; . OrthoDB EOG091G0TNU; -; . PhylomeDB P08708; -; . TreeFam TF317992; -; . Reactome R-HSA-156827; L13a-mediated translational silencing of Ceruloplasmin expression; . Reactome R-HSA-156902; Peptide chain elongation; . Reactome R-HSA-1799339; SRP-dependent cotranslational protein targeting to membrane; . Reactome R-HSA-192823; Viral mRNA Translation; . Reactome R-HSA-2408557; Selenocysteine synthesis; . Reactome R-HSA-6791226; Major pathway of rRNA processing in the nucleolus and cytosol; . Reactome R-HSA-72649; Translation initiation complex formation; . Reactome R-HSA-72689; Formation of a pool of free 40S subunits; . Reactome R-HSA-72695; Formation of the ternary complex; and subsequently; the 43S complex Reactome R-HSA-72702; Ribosomal scanning and start codon recognition; . Reactome R-HSA-72706; GTP hydrolysis and joining of the 60S ribosomal subunit; . Reactome R-HSA-72764; Eukaryotic Translation Termination; . Reactome R-HSA-975956; Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC); . Reactome R-HSA-975957; Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC); . GeneWiki RPS17; -; . GenomeRNAi 6218; -; . PRO PR:P0CW22; -; . Proteomes UP000005640; Chromosome 15; . Bgee ENSG00000184779; -; . CleanEx HS_RPS17; -; . ExpressionAtlas P08708; baseline and differential; . Genevisible P08708; HS; . GO GO:0005829; C:cytosol; TAS:Reactome; . GO GO:0022627; C:cytosolic small ribosomal subunit; IDA:UniProtKB; . GO GO:0070062; C:extracellular exosome; IDA:UniProtKB; . GO GO:0031012; C:extracellular matrix; IDA:BHF-UCL; . GO GO:0005925; C:focal adhesion; IDA:UniProtKB; . GO GO:0016020; C:membrane; IDA:UniProtKB; . GO GO:0005654; C:nucleoplasm; TAS:Reactome; . GO GO:0005840; C:ribosome; NAS:UniProtKB; . GO GO:0003723; F:RNA binding; IDA:UniProtKB; . GO GO:0003735; F:structural constituent of ribosome; NAS:UniProtKB; . GO GO:0034101; P:erythrocyte homeostasis; IMP:UniProtKB; . GO GO:0000184; P:nuclear-transcribed mRNA catabolic process; nonsense-mediated decay; TAS:Reactome GO GO:0000028; P:ribosomal small subunit assembly; IBA:GO_Central; . GO GO:0042274; P:ribosomal small subunit biogenesis; IMP:UniProtKB; . GO GO:0006364; P:rRNA processing; IMP:UniProtKB; . GO GO:0006614; P:SRP-dependent cotranslational protein targeting to membrane; TAS:Reactome; . GO GO:0006412; P:translation; IC:UniProtKB; . GO GO:0006413; P:translational initiation; NAS:UniProtKB; . GO GO:0019083; P:viral transcription; TAS:Reactome; . Gene3D 1.10.60.20; -; 1; . HAMAP MF_00511; Ribosomal_S17e; 1; . InterPro IPR001210; Ribosomal_S17e; . InterPro IPR018273; Ribosomal_S17e_CS; . PANTHER PTHR10732; PTHR10732; 1; . Pfam PF00833; Ribosomal_S17e; 1; . SUPFAM SSF116820; SSF116820; 1; . PROSITE PS00712; RIBOSOMAL_S17E; 1; .

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• The World-2DPAGE Constellation - Entry point to the world-wide 2-DPAGE resources.
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• SWISS-2DPAGE - The Geneva Two-dimensional polyacrylamide gel electrophoresis database.
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